M. J. Abraham, D. Van-der-spoel, E. Lindahl, and B. , Hess and the Gromacs Development Team, GROMACS User Manual version, p.110, 2014.

N. Goga, Benchmark of Schemes for Multiscale Molecular Dynamics Simulations, Journal of Chemical Theory and Computation, vol.11, issue.4, pp.1389-1398, 2015.
DOI : 10.1021/ct501102b

M. Praprotnik, L. Delle-site, and K. Kremer, Adaptive resolution molecular-dynamics simulation: Changing the degrees of freedom on the fly, The Journal of Chemical Physics, vol.39, issue.22, 2005.
DOI : 10.1103/PhysRevLett.85.3213

M. Praprotnik, L. Delle-site, and K. Kremer, Multiscale Simulation of Soft Matter: From Scale Bridging to Adaptive Resolution, Annual Review of Physical Chemistry, vol.59, issue.1, pp.545-571, 2008.
DOI : 10.1146/annurev.physchem.59.032607.093707

M. Christen and W. F. Van-gunsteren, Multigraining: An algorithm for simultaneous fine-grained and coarse-grained simulation of molecular systems, The Journal of Chemical Physics, vol.13, issue.15, 2006.
DOI : 10.1007/978-94-015-7658-1_21

B. Ensing, S. O. Nielsen, P. B. Moore, M. L. Klein, and M. J. Parrinello, Energy Conservation in Adaptive Hybrid Atomistic/Coarse-Grain Molecular Dynamics, Journal of Chemical Theory and Computation, vol.3, issue.3, pp.1100-1105, 2007.
DOI : 10.1021/ct600323n
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.138.2054

L. and D. Site, What is a Multiscale Problem in Molecular Dynamics?, Entropy, vol.111, issue.1, pp.23-40, 2014.
DOI : 10.1103/PhysRevLett.111.060601
URL : http://doi.org/10.3390/e16010023

S. J. Marrink, H. J. Risselada, S. Yefimov, D. P. Tieleman, and A. H. De-vries, The MARTINI Force Field:?? Coarse Grained Model for Biomolecular Simulations, The Journal of Physical Chemistry B, vol.111, issue.27, pp.7812-7824, 2007.
DOI : 10.1021/jp071097f